PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Bv_011410_ndfg.t1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Betoideae; Beta
Family bZIP
Protein Properties Length: 353aa    MW: 37059.4 Da    PI: 5.0007
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Bv_011410_ndfg.t1genomeTBVRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_172.84.9e-23261323163
                        XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
             bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                        e+elkr++rkq+NRe+ArrsR+RK+ae+eeL+++v++L++eN+ L++el++l+ e++kl s +
  Bv_011410_ndfg.t1 261 ERELKRQKRKQSNRESARRSRLRKQAECEELQRRVESLSNENSNLREELNRLSAECEKLASAN 323
                        89*********************************************************9876 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF077774.7E-31194IPR012900G-box binding protein, multifunctional mosaic region
PfamPF165961.9E-7116227No hitNo description
Gene3DG3DSA:1.20.5.1702.1E-20255321No hitNo description
PfamPF001701.6E-20261323IPR004827Basic-leucine zipper domain
SMARTSM003382.4E-21261325IPR004827Basic-leucine zipper domain
PROSITE profilePS5021713.449263326IPR004827Basic-leucine zipper domain
SuperFamilySSF579592.65E-11264320No hitNo description
CDDcd147023.13E-24266316No hitNo description
PROSITE patternPS000360268283IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0010310Biological Processregulation of hydrogen peroxide metabolic process
GO:0010629Biological Processnegative regulation of gene expression
GO:0090342Biological Processregulation of cell aging
GO:0005737Cellular Componentcytoplasm
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 353 aa     Download sequence    Send to blast
MGAAEEQTPS KPSKATSSAQ ETQTAMPAYP DWSSSMQAYY GTGATPPFFA STVAAPAPHP  60
YMWGGQHPMM PPYGTPVHYP ALYPPGGVYA HPNMAMTQNA ASAADTEGKN SDVKDQNSGK  120
KSKGNSGVGN EKAVETGKAT SGSGNEGASQ SGESGSEGSS DASDDNNQQD LSAAKKGSFE  180
LMLEDGANAQ NSSGTVSGQG SVPGKPVVAV PATNLNIGMD LWNSSAAGAV KMRPSTGAST  240
VAPGMVGREG LMPDHQWVQD ERELKRQKRK QSNRESARRS RLRKQAECEE LQRRVESLSN  300
ENSNLREELN RLSAECEKLA SANNSIKDEL TQICGPDSLQ SLGENNASGE GDS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1277283RRSRLRK
2277284RRSRLRKQ
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00039PBMTransfer from AT4G36730Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010667696.10.0PREDICTED: G-box-binding factor 1
SwissprotP427741e-111GBF1_ARATH; G-box-binding factor 1
TrEMBLA0A0J8B2I20.0A0A0J8B2I2_BETVU; Uncharacterized protein
STRINGVIT_04s0023g01360.t011e-143(Vitis vinifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36730.22e-80G-box binding factor 1